iPPI-DB

Inhibitors of Protein-Protein Interaction Database

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Compound

Physico-Chemical Properties

H donors H acceptors TPSA Nb rotatable bonds Molecular weight AlogP Nb aromatic SSSR Nb chiral centers Fsp3

Chemical similarity

Chemistry Rules

Lipinsky rule of 5 Veber Pfizer 3/75

Activity and Efficiencies

Best Activity LE LLE

Molecular Mechanism of Action

PDB ligand available

Inhibition role Stabilisation role

External Links

in PubChem in ChEMBL in ChemSpider in PDB Ligand in Drugbank

Target

PPI target filters

PFAM Bound complex Partner complex PPI Family Organism Disease Molecular function PPI

Test

Affinity assays

Biochemical tests Cellular tests

Cellular tests performed Inhibition tests performed Stabilisation tests performed Binding tests performed Pharmacokinetic tests performed Cytotoxicity tests performed In silico studies performed

Publications

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4 compounds found

Compounds per page

15 30 90

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ID (ascending) ID (descending) Molecular weight (ascending) Molecular weight (descending) ALogP (Partition coefficient octanol-1/water) (ascending) ALogP (Partition coefficient octanol-1/water) (descending) Number of aromatic Smallest Set of System Rings (SSSR) (ascending) Number of aromatic Smallest Set of System Rings (SSSR) (descending) Number of chiral centers (ascending) Number of chiral centers (descending) Number of publications (ascending) Number of publications (descending) Ligand Efficiency (ascending) Ligand Efficiency (descending) Lipophilic Efficiency (ascending) Lipophilic Efficiency (descending) Best Activity (ascending) Best Activity (descending) Number of tests available (ascending) Number of tests available (descending) PPI families (ascending) PPI families (descending)

filters used: P17948

1657

PPI Family : VEGF / VEGFR

Molecular weight: 304.09 g/mol

1658

PPI Family : VEGF / VEGFR

Molecular weight: 258.07 g/mol

1659

PPI Family : VEGF / VEGFR

Molecular weight: 270.10 g/mol

1660

PPI Family : VEGF / VEGFR

Molecular weight: 268.09 g/mol

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PPI Family

VEGF / VEGFR

PPI

PPI #3243 on VGFR1 / VEGFA

Disease

cancer (MONDO:0004992)

Molecular function

cytokine activity

receptor agonist activity

protein homodimerization activity

fibronectin binding

vascular endothelial growth factor receptor binding

vascular endothelial growth factor receptor 2 binding

vascular endothelial growth factor-activated receptor activity

ATP binding

vascular endothelial growth factor receptor 1 binding

platelet-derived growth factor receptor binding

chemoattractant activity

placental growth factor-activated receptor activity

growth factor binding

VEGF-A-activated receptor activity

heparin binding

protein heterodimerization activity

transmembrane receptor protein tyrosine kinase activity

identical protein binding

extracellular matrix binding

growth factor activity

VEGF-B-activated receptor activity

neuropilin binding

Organism

Homo sapiens

Bound complex

VGFR1 P17948-Ig_2

Partner complex

VEGFA P15692-PDGF

PFAM

PF13895 (Ig_2-Immunoglobulin domain)

PF00341 (PDGF-PDGF/VEGF domain)

Biochemical tests

chemiluminescent

Cellular tests

Molecular Weight

Select a cutoff value for the molecular weight of the compounds to be selected

Current selection range: 250.0 to 350.0

AlogP

Select a cutoff value for the AlogP of the compounds to be selected

Current selection range: 1.0 to 4.0

H donors

Select a cutoff value for the number of H donors in the compounds to be selected

Current selection range: 2.0 to 4.0

H acceptors

Select a cutoff value for the number of H acceptors in the compounds to be selected

Current selection range: 5.0 to 7.0

TPSA

Select a cutoff value for the TPSA of the compounds to be selected

Current selection range: 50.0 to 100.0

Nb rotatable bonds

Select a cutoff value for the number of rotatable bounds in the compounds to be selected

Current selection range: 2.0 to 7.0

Nb aromatic SSSR

Select a cutoff value for the number of aromatic SSSR in the compounds to be selected

Current selection range: 1.0 to 3.0

Nb chiral centers

Select a cutoff value for the number of chiral centers in the compounds to be selected

Current selection range: 0.0 to 2.0

FSP3

Select a cutoff value for the FSP3 of the compounds to be selected

Current selection range: 0.2 to 0.5

Publications

Select a cutoff value for the number of publications mentioning the compounds to be selected

Current selection range: 1.0 to 2.0

Query structure

Paste the SMILES of your molecule here:

or

Sketch or upload (in .mol format and in 2D only) the query structure here:

Select the fingerprints to use:

FP2

FP4

ECFP4

Best Activiry

Select a cutoff value for the best activity of the compounds to be selected

Current selection range: 4.0 to 6.0

LE

Select a cutoff value for the LE of the compounds to be selected

Current selection range: 0.30000000000000004 to 0.4

LLE

Select a cutoff value for the LLE of the compounds to be selected

Current selection range: 1.0 to 4.0

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